Okay guys. I played the whole game again. Here are some bizzare points that i have noted.
Don't Bite me if i am wrong.
--Age Of Aquarius--
-> There are some containers with some stuff in the mission before you go to destroy the Lucifer fleet which coincide with the Ken Mission in WiH Act 1.
-> When you integrate with the Vishnans, you get a mission to go and help Admiral Bei to destroy the Lucifer. Once accomplished, the Vishnan Sacred Keeper jumps in and says that "A Great Darkness" has come and they must all leave. Here, there is a light clue of what is the Great Darkness.
EDIT: The Vishnan and Shivan messages are not always perfect for the human brain to understand it. no system is perfect in the universe.
--War In Heaven Act 2--
-> There are references to the mathematical databases that Capt. Apries passes on to Noemi Laporte. Somewhere it is written that if it is written that if you try to analyse it for too long, it gives you headache, audio visual hallucinations, psychosis or something similar.
-> I did try to do one of the rarely done stuff. I traveled to the Vasudan Nagari Firewall and saw that Nabirasul was contacting Noemi Laporte. In the dreamscapes, he finally says that he would contact Noemi Laporte. It is even mentioned that when with the Emperor, Nabirasul loses the faculty of speech until he was on anti psychotics.
-> Al'Dawa Keeps speaking about NABOPOLOSSAR, 8800.
EDIT: NABOPOLOSSAR is the final mission in Act 3. 8800 is the time when Ancients were exterminated.
-> Shivans also speak about "aspect swarm". They mention that after the Dawn War, Brahmans rose. (Shivans are Eternal) If i am guessing right, the Dawn War took place between the Great Darkness and Shivans?
EDIT: Aspect swarm is the type of their approach toward threats.
-> Then Ken says that Al'Dawa is the Fedayeen Anima (LEADER???)- Probably referring to the Group of people who began the Fedayeen or the Pilots who Destroyed the Lucifer.
-> Ken also says "Find your way to me", is he referring to Capella/trans abyssal gate??
-> In the single player missions in the tech room, you find the following
-A UEF weapon known as the Balrog (Which none of the crafts in current armada of UEF can mount it)
-> Later in the credits, the Gorgon bombers successfully target the Spatha Wing Deployed from UEFg Masyaf and the Log shows that a Spatha Fighter was destroyed (GTF Aurora AWACS Modules???).
-> Lastly, later in the log (credits scene), they report that the GTD Imperiuse is destroyed........
These were my findings... I'll be putting Addendums if I miss out/need to correct a point.
Addendum 1- Ken Says that Shivans could rebuild collapsed nodes. To address that Shambhala was thought up.
Addendum 2- The Cargo Containers in the mission ken has 2 messages:
a) A Shivan kind of message
b) a vishnan message. (Cargo Content)