I paid special attention to reporting gamebreaking FREDding mistakes. I also made some recommendations on how to make your objectives clearer. Many - though unfortunately, not all - errors that I reported are fixed. A complete storyline overhaul would have required the recreation of all the missions from the ground up, and a lot of additional brainstorming. Shadow isn't willing to do that - He's heavily into CoW3 at the moment, which is "The Main Project." Only one CoW1 mission was recreated, that's the one where you're following an Isis in the nebula.
I liked the concept very much myself, and gave a long list of all kind of errors, which were (mostly) fixed.
As for CoW2, I played through it twice, and I found the last couple of missions (not necessarily the last three) overwhelming,