I am using the latest version of PCS (1.34).
If you hold on a bit I'll post some shots of where the glowopoints are on the Uly.
Also, there are some other bugs. I noticed that unless the on and off times are equal, the light flickers for about half its on time, and PCS won't allow me to use the beamglows, only thruster and laser glows.
Right, some pics of glowpoints.
This is the Uly in the tech room. The two large lights on the wings flash.
Here we see the Medusa in the techroom.
Here's the herc in game. The blue lights flash. There is one on each pylon affair, one faces forward, the other backwards.
Here's the Uly in game, you get a good view of the lights and my Yorrkshire Insignia.
