Apologies are in order for the dull (and not exactly explicit) title, but I swear I couldn't make out anything better than that.
So, while replaying once again Endgame (that's the mission where you defend the Knossos against NTF warships), I ran into something a bit peculiar. Once the Colossus and the Nameless NTC Deimos corvette entered the fray, I asked all ships not to engage the Deimos. But while I had not the slightest command available over the Colossus, it did obey me, shuting down its beams cannons and giving way to the Demios.
Beckoned by my curiosity, I pulled back and waited to see what happens next. A good three hours later, the Demios prevailed and pulverized the Colossus, thus destroying twenty years of effort in a mere couple of hours. The only saving grace for the Colossus is that it stood its ground to the bitter end, against overwhelming odds and a very painful death. (What if we are dying by the thousands against an enemy we should be able to obliterate in a couple of seconds? Our orders are to ignore them, so we shall not even hint at an offensive against them)
All hands bow down to the Deimos warships and to the NTF! Naught but Alpha One can stand to the Rebels, and even the Colossus is no match for the Fearsome Deimos Corvette. We might have a problem to defeat the Sathani fleet though, but Alpha One will be up to the challenge. The Sathanas 17 will have a hard time destroying the Colossus as well, unless... Unless the NTF Corvettes were actually the Sathani in disguise, as part of a bigger scheme laid by the Shivans.
Unfortunately, the debriefing did not take account of this little change in the plans, and so the NTF sabotaged an already destroyed warships. Likewise, Bosch could only commit the Iceni once a specific individual on board the Nameless Corvette had died, as only his death would allow the Iceni to jump so near the Knossos and... Well, perhaps not then, but Bosch did need the thumbs up before going in, which means the destruction of the Deimos.
I think it happened because I was using the SCP exe this time around, but I wasn't as much interested in the whys as in the consequences. Are there other such oddities which can be *Coughs* accidentally triggered *Coughs* in the game, as the saving of Capella? (Bar that annoying Shivan fleet of course) Hmm, having the victorious NTF battling the whole Shivan armada would truly make for a very different story.