I really did like Nemesis v Independance, was one of the best missions you guys could have come up with (Keep it pl33z3!!!).
I have gotten a perfect result before.
Saving all cruisers + corvettes, destroying the EAD Resolute (disabled it, disarmed all BSilvs), destroying all bombers + fighters, disarming the Nemesis's BFSilvs (nearly killed it too at 12%). I disarmed the Lindo's (forgot name) main turrets before they could rip the Ramanaya's hull apart.
I had a perfect mission in Easy difficulty, Normal is hard as hell...
I always armed myself with a Sabus bomber (Hastor + Prometheus, Sniper + 2 Helios), along with Alpha 1 (same as me), arming Alpha 3 and 4 with a Danaus, Cyclops.
Armed Gamma as Perseus's, ordered to guard the Ramanaya, sometimes Beta wing (3 and 4), so they can take care of Gaganas ripping apart Ramanaya, while I arm myself with a Hastor (rapid fire on bombs before they rip Solace, Carolina, other cruisers apart), Prometheus for secondary, then ripped apart bombers + stentors, with Beta's assistance. When the warships get in range with the Lindos, I order all of Alpha wing to disarm it, while I use my snipers to disarm the forward guns with a support ship standing by, while Beta finishes the remnants of Luna wing. When I destroy the Resolute, I always put my engines on full power to see Indy rip apart Nemesis, then I get in time to disarm Nemmy's turrets before they ripped Indy apart. Watch out as you fire your bombs, Nemmy might go mean on you and aim at your bombs with an MSilv (lost a perfect result because of that