@ Steel Prophet: The fighting was no nusance. And if they blew up capella, then blew up gamma draconis, they'd get twice as much energy (well, two stars worth) as well as blowing apart their enemy.
@ FreespaceFreak: I like that actually, from 'normal mode' to 'destroyer mode,' maybe cause it supports an element of my theory. But thinking over it, the red stuff doesn't seem like special juggernaut stuff, cause pretty much all the shivan ships have it. Maybe it is storage, or maybe it's just a shivan marker, maybe it's an organic substance that grows on the shivan metal and when the juggernauts did there thing, it died, or maybe it's the same as my origianal theory and it can go any colour and red suits the shivan armada. Could be any of those things, or another.
@ Snail: I disagree, well, if this theory stands up i do. They are not dead, but is a state that is abnormal, under the surface, their working away at a job. Just because the body lies still, doesn't mean it's dead, it could be mending a wound, or filing memories as it sleeps.
@ Droid803: Maybe, maybe not. Plausible. But my theory states not toasty saths.