Could you do both guardian and hits-left invul? That way you get the effect without worrying about beams.
Yes, you could, and that may in fact be the best way to do it. There's still something to be said for making the weapons subsystem destructible, though. Consider the WiH mission "Aristeia", where the default strategy should you lose the
AWACS is to order Beta wing, consisting of two interceptors, to charge through a substantial fighter screen to stage a frontal assault on a Hecate. Since Beta wing is invulnerable, this works much better than you might expect.