I also thought they just cleared out the museum after the heavy raider belly flopped into the pod...will have to go back and see. Anyways, being the fan boy I am, I enjoyed the episode. I like that once she was thrust back into the fleet, Ellen went right back to her old personality...you know, being a scheming, manipulative, and jealous bit..er...female dog. I'm not sure what to make of the death of Caprica's baby, but for now I'm interpreting that as a reinforcement of the theme that Cylon + Cylon society doesn't work, and Human + Human society doesn't work, that you need both together to succeed. Also, seems that Anders is gonna wake up...or perhaps that brain activity and rapid eye movement was him dreaming? In any event, I'm predicting he's gonna have something monumental to say when ever he does wake up.
Oh, and my favorite line is Hotdog when Ellen walks off the raptor: "How many dead chicks are out there??"