The problem with science/religion debates is it descends to attacking personal beliefs, which gets really personal and people get offended when core ideas/identity get attacked.
My opinion firmly remains that really both groups are foolishly fighting over the totem poll of "truth maker," the problem is how the hell you define or make truth? Then it goes into the philosophical problems, and you get nowhere because you run into paradoxes. Then reality doesn't make sense anymore and everyone starts hitting their heads against walls.
The fundamental difference is that science has no inherent problems if one truth turns out to be "wrong" - the contrary... the whole point is to question everything and only accept as truth what can be rationally explained and verified. (Which in no way rules out the possibility that one theory gets replaced by an even better and more complete explanation as our understanding of the universe grows.)
If a religious truth turns out to be proven wrong... all the fundamentalists got their panties in their bunch again and wish they could still burn people on a stake.
And while one can certainly argue that science in no way contradicts the belief in a higher power as such... the use of the scientific method certainly already uncovered several rational explanations that do not only contradict, but outright prove wrong several of the "truths" that can be found in some books that some men wrote down a few thousand years ago. (Big surprise lol)
What science can not do... is tell us how to become better persons or build better societies. More efficient ones? Yes... but "better" ones? Once you discuss what is "better or worse" for human societies you quickly reach the limits of science.
That is I believe where a lot of the misunderstanding comes from... science is "NOT" a philosophy as such. Science can't tell you what "good or evil" is.
Religion has no problems with clear definition of "good and evil"... yet decreeing what is "good and evil" and telling people what to do from a position of absolute divine authority - as it has so often been done in the past - is itself rather questionable - or even "evil itself - when seen through the lens of philosophy and ethics.
In summary... we can't disregard the scientific method if we don t want to go back to the dark ages.
We can't do without some kind of moral system to glue our societies together either...
... but we sure could do without religion if philosophy and ethics were there to pick up the slack.
My prediction? The harder a religion tries to fight against verifiable facts the quicker that religion will find itself become irrelevant in the eyes of any educated person.
(... and the more it will have to depend on fundamentalism and fanatism if it doesn't want to simply cease to exist.)