As far as I know, the OS shouldn't have any bearing on it. Since this error probably comes up on loading the first mission I saved it using the latest Zathras patch so it shouldn't be looking for out-of-date or non-existent ships when loading the missions. Just in case, I edited every mission in the campaign that uses the Thunderbolt.
I have no idea what could be causing the AI profile conflict since this campaign shouldn't be creating any AI profiles and it doesn't have a custom table to its name, so I'm actually stumped on that one.
This isn't a .vp file, but it can be extracted to whatever folder the .vp file is in. Just make sure the .vp file is in a folder inside the core TBP directory.
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